RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os02g42700.1 View Network Show in Genome Browser |
| Other Names | Os02g0639900 |
| Description | thioredoxin, putative, expressed |
| Gene Attributes | Chromosome: Chr2 CDS Coordinates (5'-3'): 25679712-25683601 Nucleotide Length: 522 |
| Protein-coding | LOC_Os02g42700 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0030234 | enzyme regulator activity | Molecular Function | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| GO:0009579 | thylakoid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g10340 LOC_Os01g58194 LOC_Os02g07230 LOC_Os02g37060 |
| Downstream Genes | LOC_Os05g47930 LOC_Os04g51920 LOC_Os07g42910 LOC_Os03g27290 LOC_Os03g29240 LOC_Os03g29190 LOC_Os12g37960 LOC_Os03g49580 LOC_Os07g47640 |
| Database Links | |
|---|---|
| Gramene | LOC_Os02g42700.1 |
| Rice Genome Annotation | LOC_Os02g42700.1 |
| Ricechip | LOC_Os02g42700.1 |
| KEGG | osa:4330107 dosa:Os02t0639900-01 |
| Entrez-Gene | 4330107 |