RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os02g42790.1 View Network Show in Genome Browser |
| Other Names | Os02g0640600 |
| Description | short-chain dehydrogenase/reductase, putative, expressed |
| Gene Attributes | Chromosome: Chr2 CDS Coordinates (5'-3'): 25727478-25729411 Nucleotide Length: 975 |
| Protein-coding | LOC_Os02g42790 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0009628 | response to abiotic stimulus | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g38440 LOC_Os01g05840 LOC_Os02g41580 |
| Downstream Genes | LOC_Os11g24484 LOC_Os10g35370 LOC_Os08g37130 LOC_Os07g37420 LOC_Os04g52400 LOC_Os03g62590 LOC_Os02g47350 LOC_Os11g31900 LOC_Os03g63930 LOC_Os12g34890 LOC_Os03g22950 More.. |
| Pathways | |
|---|---|
| Metacyc Pathways | ENTBACSYN-PWY |
| Database Links | |
|---|---|
| Gramene | LOC_Os02g42790.1 |
| Rice Genome Annotation | LOC_Os02g42790.1 |
| Ricechip | LOC_Os02g42790.1 |
| KEGG | dosa:Os02t0640600-00 |