RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os02g42820.1 View Network Show in Genome Browser |
| Other Names | Os02g0641000 |
| Description | OsPLIM2a - LIM domain protein, putative actin-binding protein and transcription factor, expressed |
| Gene Attributes | Chromosome: Chr2 CDS Coordinates (5'-3'): 25739666-25741262 Nucleotide Length: 621 |
| Protein-coding | LOC_Os02g42820 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0016043 | cellular component organization | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0005856 | cytoskeleton | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g48170 LOC_Os02g07900 LOC_Os01g50010 LOC_Os02g03890 LOC_Os01g51380 LOC_Os01g65860 LOC_Os01g14950 LOC_Os01g55549 LOC_Os02g02410 LOC_Os02g05330 LOC_Os02g22780 More.. |
| Downstream Genes | LOC_Os06g08400 LOC_Os03g16090 LOC_Os06g07830 LOC_Os02g55970 LOC_Os06g45050 LOC_Os05g47550 LOC_Os10g23090 LOC_Os03g46650 LOC_Os06g48630 LOC_Os05g48820 LOC_Os05g06350 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os02g42820.1 |
| Rice Genome Annotation | LOC_Os02g42820.1 |
| Ricechip | LOC_Os02g42820.1 |
| KEGG | osa:4330114 dosa:Os02t0641000-00 |
| Entrez-Gene | 4330114 |