RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os02g42860.1 View Network Show in Genome Browser |
| Other Names | Os02g0641800 |
| Description | DEAD-box ATP-dependent RNA helicase, putative, expressed |
| Gene Attributes | Chromosome: Chr2 CDS Coordinates (5'-3'): 25767209-25774463 Nucleotide Length: 1527 |
| Protein-coding | LOC_Os02g42860 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| IEA | ||||
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g15310 LOC_Os02g01740 LOC_Os02g30624 LOC_Os01g15860 LOC_Os01g64690 LOC_Os02g01250 LOC_Os02g04480 LOC_Os02g02150 LOC_Os02g38200 LOC_Os02g14780 LOC_Os01g73880 More.. |
| Downstream Genes | LOC_Os04g36810 LOC_Os08g08040 LOC_Os09g02700 LOC_Os02g56210 LOC_Os04g31950 LOC_Os08g22354 LOC_Os10g35550 LOC_Os05g07050 LOC_Os03g07080 LOC_Os10g34520 LOC_Os07g10256 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR5533 |
| Pathways | |
|---|---|
| KEGG Pathways | rn00230 rn00680 |
| Database Links | |
|---|---|
| Gramene | LOC_Os02g42860.1 |
| Rice Genome Annotation | LOC_Os02g42860.1 |
| Ricechip | LOC_Os02g42860.1 |
| KEGG | osa:4330120 dosa:Os02t0641800-02 |
| Entrez-Gene | 4330120 |