RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os02g42870.1 View Network Show in Genome Browser |
| Other Names | Os02g0641900 |
| Description | MYB family transcription factor, putative, expressed |
| Gene Attributes | Chromosome: Chr2 CDS Coordinates (5'-3'): 25778079-25780795 Nucleotide Length: 903 |
| Protein-coding | LOC_Os02g42870 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0009719 | response to endogenous stimulus | Biological Process | IEA | |
| GO:0003677 | DNA binding | Molecular Function | IEA | |
| GO:0003700 | sequence-specific DNA binding transcription factor activity | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g16650 LOC_Os02g06592 LOC_Os02g06640 LOC_Os02g32350 |
| Downstream Genes | LOC_Os06g47840 LOC_Os08g42600 LOC_Os12g39210 LOC_Os12g31810 LOC_Os07g23110 LOC_Os02g56020 LOC_Os03g41100 LOC_Os03g02680 LOC_Os11g32900 |
| Database Links | |
|---|---|
| Gramene | LOC_Os02g42870.1 |
| Rice Genome Annotation | LOC_Os02g42870.1 |
| Ricechip | LOC_Os02g42870.1 |
| KEGG | osa:4330121 dosa:Os02t0641900-01 |
| Entrez-Gene | 4330121 |