RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os02g42890.1 View Network Show in Genome Browser |
| Other Names | Os02g0642300 |
| Description | cytochrome b561, putative, expressed |
| Gene Attributes | Chromosome: Chr2 CDS Coordinates (5'-3'): 25797295-25800034 Nucleotide Length: 705 |
| Protein-coding | LOC_Os02g42890 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| GO:0005773 | vacuole | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g67030 LOC_Os01g47620 LOC_Os01g48850 LOC_Os01g60930 LOC_Os01g25320 |
| Downstream Genes | LOC_Os03g09850 LOC_Os08g41280 LOC_Os03g09900 LOC_Os05g49040 LOC_Os09g38520 LOC_Os09g32470 LOC_Os05g48270 LOC_Os04g41810 |
| Database Links | |
|---|---|
| Gramene | LOC_Os02g42890.1 |
| Rice Genome Annotation | LOC_Os02g42890.1 |
| Ricechip | LOC_Os02g42890.1 |
| KEGG | osa:4330125 dosa:Os02t0642300-01 |
| Entrez-Gene | 4330125 |