RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os02g43340.1 View Network Show in Genome Browser |
| Other Names | Os02g0649400 |
| Description | hydrolase, alpha/beta fold family domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr2 CDS Coordinates (5'-3'): 26146594-26151338 Nucleotide Length: 1341 |
| Protein-coding | LOC_Os02g43340 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009790 | embryo development | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0009791 | post-embryonic development | Biological Process | IEA | |
| GO:0000003 | reproduction | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g66240 LOC_Os01g10250 LOC_Os01g72870 LOC_Os01g71300 LOC_Os01g36940 LOC_Os02g18850 LOC_Os01g39790 LOC_Os01g54960 LOC_Os01g39800 |
| Downstream Genes | LOC_Os04g36620 LOC_Os09g34860 LOC_Os09g23150 LOC_Os10g08840 LOC_Os10g35540 LOC_Os07g38830 LOC_Os11g11000 LOC_Os10g35520 LOC_Os10g35530 LOC_Os10g35490 LOC_Os05g46210 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR5809 |
| Database Links | |
|---|---|
| Gramene | LOC_Os02g43340.1 |
| Rice Genome Annotation | LOC_Os02g43340.1 |
| Ricechip | LOC_Os02g43340.1 |
| KEGG | osa:4330156 dosa:Os02t0649400-00 |
| Entrez-Gene | 4330156 |