RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os02g43350.1 View Network Show in Genome Browser |
| Other Names | Os02g0649700 |
| Description | OsFtsH7 FtsH protease, homologue of AtFtsH7, expressed |
| Gene Attributes | Chromosome: Chr2 CDS Coordinates (5'-3'): 26156276-26162463 Nucleotide Length: 2469 |
| Protein-coding | LOC_Os02g43350 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009056 | catabolic process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0019538 | protein metabolic process | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g16670 LOC_Os01g38970 LOC_Os01g62420 |
| Downstream Genes | LOC_Os07g42632 LOC_Os06g49140 LOC_Os05g49230 LOC_Os03g60750 LOC_Os09g27270 LOC_Os10g36860 LOC_Os05g08950 LOC_Os03g14280 LOC_Os02g47850 LOC_Os08g44210 LOC_Os07g09720 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR5075 |
| Database Links | |
|---|---|
| Gramene | LOC_Os02g43350.1 |
| Rice Genome Annotation | LOC_Os02g43350.1 |
| Ricechip | LOC_Os02g43350.1 |
| KEGG | osa:4330159 dosa:Os02t0649700-01 |
| Entrez-Gene | 4330159 |