RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os02g43560.1 View Network Show in Genome Browser |
| Other Names | Os02g0652100 |
| Description | WRKY34, expressed |
| Gene Attributes | Chromosome: Chr2 CDS Coordinates (5'-3'): 26280253-26283914 Nucleotide Length: 570 |
| Protein-coding | LOC_Os02g43560 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0003700 | sequence-specific DNA binding transcription factor activity | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g17000 LOC_Os01g12490 LOC_Os02g06840 LOC_Os02g32540 LOC_Os02g32530 LOC_Os02g28870 LOC_Os02g42810 |
| Downstream Genes | LOC_Os12g15314 LOC_Os07g30800 LOC_Os04g44470 LOC_Os10g29050 LOC_Os04g50090 LOC_Os03g57560 LOC_Os07g15680 LOC_Os04g54440 LOC_Os04g54430 LOC_Os08g17390 LOC_Os03g47620 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR818a osa-miR818b osa-miR818c osa-miR818d osa-miR818e osa-miR1436 osa-miR1866-5p
|
| Reference | |
|---|---|
| PubMed | 15618416 |
| Database Links | |
|---|---|
| Gramene | LOC_Os02g43560.1 |
| Rice Genome Annotation | LOC_Os02g43560.1 |
| Ricechip | LOC_Os02g43560.1 |
| KEGG | osa:4330173 dosa:Os02t0652100-01 |
| Entrez-Gene | 4330173 |