RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os02g43760.1 View Network Show in Genome Browser |
| Other Names | Os02g0654500 |
| Description | ubiquitin carboxyl-terminal hydrolase, family 1, putative, expressed |
| Gene Attributes | Chromosome: Chr2 CDS Coordinates (5'-3'): 26404857-26409513 Nucleotide Length: 690 |
| Protein-coding | LOC_Os02g43760 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009056 | catabolic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0019538 | protein metabolic process | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| GO:0005622 | intracellular | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g22490 LOC_Os01g70020 LOC_Os02g42320 LOC_Os02g36710 LOC_Os01g13730 LOC_Os02g37430 LOC_Os02g04050 LOC_Os02g39830 LOC_Os02g39550 LOC_Os01g27040 LOC_Os02g10790 More.. |
| Downstream Genes | LOC_Os11g42420 LOC_Os05g06770 LOC_Os03g63920 LOC_Os03g08280 LOC_Os08g29650 LOC_Os03g06670 LOC_Os03g25450 LOC_Os03g26970 LOC_Os06g36700 LOC_Os08g04280 LOC_Os08g06344 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os02g43760.1 |
| Rice Genome Annotation | LOC_Os02g43760.1 |
| Ricechip | LOC_Os02g43760.1 |
| KEGG | osa:4330187 dosa:Os02t0654500-01 |
| Entrez-Gene | 4330187 |