RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os02g43790.1 View Network Show in Genome Browser |
| Other Names | Os02g0654700 |
| Description | ethylene-responsive transcription factor, putative, expressed |
| Gene Attributes | Chromosome: Chr2 CDS Coordinates (5'-3'): 26422182-26423485 Nucleotide Length: 912 |
| Protein-coding | LOC_Os02g43790 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0003677 | DNA binding | Molecular Function | IEA | |
| GO:0003700 | sequence-specific DNA binding transcription factor activity | Molecular Function | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0005635 | nuclear envelope | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g41510 LOC_Os02g08440 |
| Downstream Genes | LOC_Os12g36110 LOC_Os09g17152 LOC_Os03g53020 LOC_Os04g13210 |
| Reference | |
|---|---|
| PubMed | 16436304 15604704 |
| Database Links | |
|---|---|
| Gramene | LOC_Os02g43790.1 |
| Rice Genome Annotation | LOC_Os02g43790.1 |
| Ricechip | LOC_Os02g43790.1 |
| KEGG | osa:4330189 dosa:Os02t0654700-01 |
| Entrez-Gene | 4330189 |