RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os02g43830.1 View Network Show in Genome Browser |
| Other Names | Os02g0655300 |
| Description | 3-isopropylmalate dehydratase small subunit 2, putative, expressed |
| Gene Attributes | Chromosome: Chr2 CDS Coordinates (5'-3'): 26465591-26469280 Nucleotide Length: 774 |
| Protein-coding | LOC_Os02g43830 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0009628 | response to abiotic stimulus | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g03260 LOC_Os02g05780 LOC_Os02g39570 LOC_Os01g46380 LOC_Os01g32080 LOC_Os01g67134 LOC_Os02g13530 LOC_Os01g46610 LOC_Os02g30630 |
| Downstream Genes | LOC_Os03g45320 LOC_Os12g04440 LOC_Os11g04670 LOC_Os08g09200 LOC_Os09g20090 LOC_Os07g12890 LOC_Os06g51280 LOC_Os08g44530 LOC_Os03g63410 LOC_Os11g41610 LOC_Os03g56241 More.. |
| Pathways | |
|---|---|
| KEGG Pathways | rn00290 rn00660 rn01100 rn01210 |
| Metacyc Pathways | LEUSYN-PWY |
| Database Links | |
|---|---|
| Gramene | LOC_Os02g43830.1 |
| Rice Genome Annotation | LOC_Os02g43830.1 |
| Ricechip | LOC_Os02g43830.1 |
| KEGG | osa:4330192 dosa:Os02t0655300-01 |
| Entrez-Gene | 4330192 |