RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os02g44810.1 View Network Show in Genome Browser |
| Other Names | Os02g0668400 |
| Description | tRNA pseudouridine synthase family protein, putative, expressed |
| Gene Attributes | Chromosome: Chr2 CDS Coordinates (5'-3'): 27134555-27136740 Nucleotide Length: 1746 |
| Protein-coding | LOC_Os02g44810 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g02360 LOC_Os01g34200 LOC_Os01g65730 LOC_Os01g43020 LOC_Os01g40340 LOC_Os01g65220 LOC_Os01g13730 LOC_Os01g54540 LOC_Os02g10780 LOC_Os02g34570 LOC_Os01g32880 More.. |
| Downstream Genes | LOC_Os03g19960 LOC_Os12g04010 LOC_Os03g63730 LOC_Os11g04200 LOC_Os03g22350 LOC_Os10g42320 LOC_Os03g44780 LOC_Os06g01980 LOC_Os06g40120 LOC_Os03g61200 LOC_Os03g28960 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os02g44810.1 |
| Rice Genome Annotation | LOC_Os02g44810.1 |
| Ricechip | LOC_Os02g44810.1 |
| KEGG | osa:4330262 dosa:Os02t0668400-00 |
| Entrez-Gene | 4330262 |