RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os02g45540.1 View Network Show in Genome Browser |
| Other Names | Os02g0678400 |
| Description | synthase, putative, expressed |
| Gene Attributes | Chromosome: Chr2 CDS Coordinates (5'-3'): 27709065-27713159 Nucleotide Length: 936 |
| Protein-coding | LOC_Os02g45540 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0005623 | cell | Cellular Component | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Downstream Genes | LOC_Os02g57990 LOC_Os03g17000 LOC_Os12g08060 LOC_Os05g11360 LOC_Os02g57180 LOC_Os03g07140 LOC_Os07g49120 LOC_Os04g10010 LOC_Os03g18740 LOC_Os04g10000 LOC_Os06g25439 More.. |
| Pathways | |
|---|---|
| KEGG Pathways | rn00053 |
| Metacyc Pathways | DTDPRHAMSYN-PWY |
| Database Links | |
|---|---|
| Gramene | LOC_Os02g45540.1 |
| Rice Genome Annotation | LOC_Os02g45540.1 |
| Ricechip | LOC_Os02g45540.1 |
| KEGG | osa:9267465 dosa:Os02t0678400-01 |
| Entrez-Gene | 9267465 |