RiceNetDB

RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.

General Information
Locus Name	LOC_Os02g45770.1 View Network Show in Genome Browser
Other Names	Os02g0682200
Description	OsMADS6 - MADS-box family gene with MIKCc type-box, expressed
Gene Attributes	Chromosome: Chr2 CDS Coordinates (5'-3'): 27875979-27884079 Nucleotide Length: 753
Protein-coding	LOC_Os02g45770

Gene Ontology Classification
GO	Name	Type	Code
GO:0009058	biosynthetic process	Biological Process	IEA
GO:0009908	flower development	Biological Process	IEA
GO:0006139	nucleobase, nucleoside, nucleotide and nucleic acid metabolic process	Biological Process	IEA
GO:0009791	post-embryonic development	Biological Process	IEA
GO:0000003	reproduction	Biological Process	IEA
GO:0003677	DNA binding	Molecular Function	IEA
GO:0005515	protein binding	Molecular Function	IEA
GO:0003700	sequence-specific DNA binding transcription factor activity	Molecular Function	IEA
GO:0005634	nucleus	Cellular Component	IEA

Regulatory Genes ( Show Network In Viewer )
Upstream Genes	LOC_Os01g11940 LOC_Os01g55040 LOC_Os01g22710 LOC_Os02g04490 LOC_Os02g35010 LOC_Os02g38020 LOC_Os02g44642 LOC_Os02g14900 LOC_Os01g66690
Downstream Genes	LOC_Os07g01820 LOC_Os03g54160 LOC_Os11g40100 LOC_Os11g10100 LOC_Os06g08380 LOC_Os12g31350 LOC_Os07g41370 LOC_Os08g41950 LOC_Os09g32948 LOC_Os09g12800 LOC_Os07g19560 More..

Reference
PubMed	22016342 22933119 17640358 19820190 20822505 21784949 20038961

Database Links
Gramene	LOC_Os02g45770.1
Rice Genome Annotation	LOC_Os02g45770.1
Ricechip	LOC_Os02g45770.1
KEGG	osa:4330328 dosa:Os02t0682200-01
Entrez-Gene	4330328