RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os02g46030.1 View Network Show in Genome Browser |
| Other Names | Os02g0685200 |
| Description | MYB family transcription factor, putative, expressed |
| Gene Attributes | Chromosome: Chr2 CDS Coordinates (5'-3'): 28041115-28044149 Nucleotide Length: 1476 |
| Protein-coding | LOC_Os02g46030 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0009719 | response to endogenous stimulus | Biological Process | IEA | |
| GO:0007165 | signal transduction | Biological Process | IEA | |
| GO:0003677 | DNA binding | Molecular Function | IEA | |
| GO:0003700 | sequence-specific DNA binding transcription factor activity | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g07770 LOC_Os02g09810 LOC_Os02g10860 LOC_Os02g45450 LOC_Os01g07120 LOC_Os01g48420 |
| Downstream Genes | LOC_Os04g47890 LOC_Os02g47190 LOC_Os03g12350 LOC_Os05g40960 LOC_Os10g26670 LOC_Os09g36220 LOC_Os06g04600 LOC_Os03g13800 LOC_Os05g19380 LOC_Os04g48350 LOC_Os04g45290 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os02g46030.1 |
| Rice Genome Annotation | LOC_Os02g46030.1 |
| Ricechip | LOC_Os02g46030.1 |
| KEGG | osa:4330349 dosa:Os02t0685200-01 |
| Entrez-Gene | 4330349 |