RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os02g46080.1 View Network Show in Genome Browser |
| Other Names | Os02g0685600 |
| Description | protein phosphatase 2C, putative, expressed |
| Gene Attributes | Chromosome: Chr2 CDS Coordinates (5'-3'): 28078822-28081773 Nucleotide Length: 1164 |
| Protein-coding | LOC_Os02g46080 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0006464 | protein modification process | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0005623 | cell | Cellular Component | IEA | |
| GO:0005739 | mitochondrion | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g05630 LOC_Os02g15594 LOC_Os01g43100 LOC_Os01g49690 LOC_Os01g62500 |
| Downstream Genes | LOC_Os06g05900 LOC_Os06g48300 LOC_Os04g56450 LOC_Os04g12580 LOC_Os05g50970 LOC_Os10g02970 LOC_Os03g17780 LOC_Os04g12560 LOC_Os10g11140 LOC_Os02g49800 LOC_Os03g59470 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR530-5p |
| Database Links | |
|---|---|
| Gramene | LOC_Os02g46080.1 |
| Rice Genome Annotation | LOC_Os02g46080.1 |
| Ricechip | LOC_Os02g46080.1 |
| KEGG | osa:4330350 dosa:Os02t0685600-01 |
| Entrez-Gene | 4330350 |