RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os02g46440.1 View Network Show in Genome Browser |
| Other Names | Os02g0689700 |
| Description | expressed protein |
| Gene Attributes | Chromosome: Chr2 CDS Coordinates (5'-3'): 28289765-28291683 Nucleotide Length: 546 |
| Protein-coding | LOC_Os02g46440 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0006412 | translation | Biological Process | IEA | |
| GO:0005198 | structural molecule activity | Molecular Function | IEA | |
| GO:0005622 | intracellular | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| GO:0005840 | ribosome | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g01230 LOC_Os02g06700 LOC_Os01g62210 LOC_Os02g27760 LOC_Os02g33140 LOC_Os02g14059 LOC_Os01g10820 LOC_Os01g42980 LOC_Os01g42640 LOC_Os01g14830 LOC_Os02g15610 More.. |
| Downstream Genes | LOC_Os03g54040 LOC_Os03g24020 LOC_Os03g51510 LOC_Os03g34040 LOC_Os08g15460 LOC_Os05g33020 LOC_Os12g42180 LOC_Os12g04160 LOC_Os11g04370 LOC_Os06g46930 LOC_Os08g27090 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR816 |
| Database Links | |
|---|---|
| Gramene | LOC_Os02g46440.1 |
| Rice Genome Annotation | LOC_Os02g46440.1 |
| Ricechip | LOC_Os02g46440.1 |
| KEGG | osa:4330370 dosa:Os02t0689700-01 |
| Entrez-Gene | 4330370 |