RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os02g46962.3 View Network Show in Genome Browser |
| Other Names | Os02g0697300 |
| Description | VHS and GAT domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr2 CDS Coordinates (5'-3'): 28673580-28676872 Nucleotide Length: 1179 |
| Protein-coding | LOC_Os02g46962 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0005215 | transporter activity | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| GO:0005794 | Golgi apparatus | Cellular Component | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g13160 LOC_Os02g19170 |
| Downstream Genes | LOC_Os08g08830 LOC_Os07g30170 |
| Database Links | |
|---|---|
| Gramene | LOC_Os02g46962.3 |
| Rice Genome Annotation | LOC_Os02g46962.3 |
| Ricechip | LOC_Os02g46962.3 |
| KEGG | osa:4330406 dosa:Os02t0697300-01 |
| Entrez-Gene | 4330406 |