RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os02g47350.1 View Network Show in Genome Browser |
| Other Names | Os02g0701900 |
| Description | oxidoreductase, short chain dehydrogenase/reductase family, putative, expressed |
| Gene Attributes | Chromosome: Chr2 CDS Coordinates (5'-3'): 28914744-28916890 Nucleotide Length: 984 |
| Protein-coding | LOC_Os02g47350 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0005623 | cell | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g39490 LOC_Os02g42790 LOC_Os01g70430 LOC_Os02g10540 LOC_Os02g35770 |
| Downstream Genes | LOC_Os02g54470 LOC_Os04g44950 LOC_Os04g44924 LOC_Os12g41590 LOC_Os09g17750 LOC_Os07g48640 LOC_Os03g62590 LOC_Os03g43890 LOC_Os07g08170 LOC_Os10g34670 |
| Pathways | |
|---|---|
| KEGG Pathways | rn00600 rn01100 |
| Metacyc Pathways | ENTBACSYN-PWY |
| Database Links | |
|---|---|
| Gramene | LOC_Os02g47350.1 |
| Rice Genome Annotation | LOC_Os02g47350.1 |
| Ricechip | LOC_Os02g47350.1 |
| KEGG | osa:4330439 dosa:Os02t0701900-01 |
| Entrez-Gene | 4330439 |