RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os02g47510.1 View Network Show in Genome Browser |
| Other Names | Os02g0704000 |
| Description | 9-cis-epoxycarotenoid dioxygenase 1, chloroplast precursor, putative, expressed |
| Gene Attributes | Chromosome: Chr2 CDS Coordinates (5'-3'): 29026070-29028259 Nucleotide Length: 1917 |
| Protein-coding | LOC_Os02g47510 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g19150 |
| Downstream Genes | LOC_Os04g52500 LOC_Os03g57160 LOC_Os09g23550 LOC_Os02g53860 LOC_Os10g41749 LOC_Os04g36720 LOC_Os10g36500 LOC_Os10g18340 LOC_Os10g28600 LOC_Os07g29410 LOC_Os10g41460 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR6249a osa-miR6249b osa-miR2102-5p |
| Pathways | |
|---|---|
| KEGG Pathways | rn00906 rn01110 rn01100 |
| Metacyc Pathways | PWY-695 |
| Database Links | |
|---|---|
| Gramene | LOC_Os02g47510.1 |
| Rice Genome Annotation | LOC_Os02g47510.1 |
| Ricechip | LOC_Os02g47510.1 |
| KEGG | osa:4330451 dosa:Os02t0704000-01 |
| Entrez-Gene | 4330451 |