RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os02g47590.1 View Network Show in Genome Browser |
| Other Names | Os02g0704800 |
| Description | ornithine carbamoyltransferase, putative, expressed |
| Gene Attributes | Chromosome: Chr2 CDS Coordinates (5'-3'): 29078261-29081262 Nucleotide Length: 1104 |
| Protein-coding | LOC_Os02g47590 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0016740 | transferase activity | Molecular Function | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g38970 LOC_Os02g44000 LOC_Os02g10070 LOC_Os01g49290 LOC_Os01g42770 LOC_Os02g42320 LOC_Os02g03260 LOC_Os01g74650 LOC_Os01g37090 LOC_Os01g59920 LOC_Os01g13730 More.. |
| Downstream Genes | LOC_Os05g03830 LOC_Os07g27780 LOC_Os12g13320 LOC_Os03g44150 LOC_Os11g19770 LOC_Os03g19280 LOC_Os03g42110 LOC_Os04g01590 LOC_Os10g35170 LOC_Os08g34720 LOC_Os12g07050 More.. |
| Pathways | |
|---|---|
| KEGG Pathways | rn00240 rn00250 rn01100 |
| Metacyc Pathways | PWY-5 PWY-4981 ARGSYNBSUB-PWY PWY-4984 ARGININE-SYN4-PWY ARGSYN-PWY CITRULLINE-DEG-PWY CITRULBIO-PWY PWY0-162 |
| Database Links | |
|---|---|
| Gramene | LOC_Os02g47590.1 |
| Rice Genome Annotation | LOC_Os02g47590.1 |
| Ricechip | LOC_Os02g47590.1 |
| KEGG | osa:9269231 dosa:Os02t0704800-01 |
| Entrez-Gene | 9269231 |