RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os02g47880.1 View Network Show in Genome Browser |
| Other Names | Os02g0708400 |
| Description | tetratricopeptide repeat domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr2 CDS Coordinates (5'-3'): 29287705-29291634 Nucleotide Length: 2136 |
| Protein-coding | LOC_Os02g47880 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009653 | anatomical structure morphogenesis | Biological Process | IEA | |
| GO:0030154 | cell differentiation | Biological Process | IEA | |
| GO:0016049 | cell growth | Biological Process | IEA | |
| GO:0016043 | cellular component organization | Biological Process | IEA | |
| GO:0007275 | multicellular organismal development | Biological Process | IEA | |
| GO:0009856 | pollination | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g09359 LOC_Os01g43030 LOC_Os01g73990 LOC_Os02g46860 LOC_Os02g46850 |
| Downstream Genes | LOC_Os07g29360 LOC_Os03g14610 LOC_Os04g58130 LOC_Os05g02820 LOC_Os05g11550 LOC_Os12g41400 LOC_Os12g07740 LOC_Os03g06350 LOC_Os03g61620 LOC_Os04g44750 LOC_Os08g05830 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os02g47880.1 |
| Rice Genome Annotation | LOC_Os02g47880.1 |
| Ricechip | LOC_Os02g47880.1 |
| KEGG | osa:4330477 dosa:Os02t0708400-01 |
| Entrez-Gene | 4330477 |