RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os02g47940.1 View Network Show in Genome Browser |
| Other Names | Os02g0709200 |
| Description | aminotransferase, classes I and II, domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr2 CDS Coordinates (5'-3'): 29324711-29328625 Nucleotide Length: 1278 |
| Protein-coding | LOC_Os02g47940 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0016740 | transferase activity | Molecular Function | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g43850 LOC_Os01g16146 LOC_Os02g08480 LOC_Os01g70380 LOC_Os01g70370 LOC_Os02g14110 LOC_Os02g16550 LOC_Os02g26814 LOC_Os01g70360 LOC_Os01g13190 LOC_Os01g53450 More.. |
| Downstream Genes | LOC_Os04g46930 LOC_Os03g04240 LOC_Os03g04250 LOC_Os04g38450 LOC_Os03g04169 LOC_Os11g31640 LOC_Os04g48770 LOC_Os12g35580 LOC_Os08g04810 LOC_Os06g35540 LOC_Os08g34750 More.. |
| Pathways | |
|---|---|
| KEGG Pathways | rn00270 rn01100 rn01110 rn00340 |
| Metacyc Pathways | ETHYL-PWY PWY-4361 HISTSYN-PWY |
| Database Links | |
|---|---|
| Gramene | LOC_Os02g47940.1 |
| Rice Genome Annotation | LOC_Os02g47940.1 |
| Ricechip | LOC_Os02g47940.1 |
| KEGG | osa:4330482 dosa:Os02t0709200-01 |
| Entrez-Gene | 4330482 |