RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os02g48290.1 View Network Show in Genome Browser |
| Other Names | Os02g0713400 |
| Description | thioredoxin reductase 2, putative, expressed |
| Gene Attributes | Chromosome: Chr2 CDS Coordinates (5'-3'): 29550948-29554249 Nucleotide Length: 996 |
| Protein-coding | LOC_Os02g48290 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0016049 | cell growth | Biological Process | IEA | |
| GO:0019725 | cellular homeostasis | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0009856 | pollination | Biological Process | IEA | |
| GO:0009791 | post-embryonic development | Biological Process | IEA | |
| GO:0000003 | reproduction | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| GO:0005739 | mitochondrion | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g44500 LOC_Os01g47340 LOC_Os02g17700 LOC_Os02g05680 LOC_Os01g45760 LOC_Os01g48960 LOC_Os01g53200 LOC_Os01g34480 LOC_Os02g37010 LOC_Os02g33450 LOC_Os01g22520 More.. |
| Downstream Genes | LOC_Os11g18170 LOC_Os05g34770 LOC_Os05g49300 LOC_Os06g12580 LOC_Os03g06740 LOC_Os02g56850 LOC_Os06g22140 LOC_Os04g03980 LOC_Os03g58630 LOC_Os06g44910 LOC_Os12g08780 More.. |
| Pathways | |
|---|---|
| KEGG Pathways | rn00240 rn00450 |
| Metacyc Pathways | THIOREDOX-PWY |
| Database Links | |
|---|---|
| Gramene | LOC_Os02g48290.1 |
| Rice Genome Annotation | LOC_Os02g48290.1 |
| Ricechip | LOC_Os02g48290.1 |
| KEGG | osa:4330505 dosa:Os02t0713400-01 |
| Entrez-Gene | 4330505 |