RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os02g48360.1 View Network Show in Genome Browser |
| Other Names | Os02g0714200 |
| Description | pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit alpha, putative, expressed |
| Gene Attributes | Chromosome: Chr2 CDS Coordinates (5'-3'): 29604449-29610243 Nucleotide Length: 1854 |
| Protein-coding | LOC_Os02g48360 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0005975 | carbohydrate metabolic process | Biological Process | IEA | |
| GO:0009056 | catabolic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006091 | generation of precursor metabolites and energy | Biological Process | IEA | |
| GO:0015979 | photosynthesis | Biological Process | IEA | |
| GO:0016301 | kinase activity | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g28810 LOC_Os01g16960 LOC_Os01g47080 LOC_Os02g36500 LOC_Os01g73160 LOC_Os02g47130 LOC_Os01g12650 LOC_Os01g49200 LOC_Os01g40570 |
| Downstream Genes | LOC_Os06g46500 LOC_Os08g28730 LOC_Os05g46550 LOC_Os09g16920 LOC_Os02g57240 LOC_Os09g32250 LOC_Os06g09630 LOC_Os07g42450 LOC_Os03g63400 LOC_Os03g56820 LOC_Os09g12600 More.. |
| Pathways | |
|---|---|
| KEGG Pathways | rn00051 |
| Metacyc Pathways | PWY-1042 PWY-6531 ANAEROFRUCAT-PWY PWY-3801 GLYCOLYSIS |
| Database Links | |
|---|---|
| Gramene | LOC_Os02g48360.1 |
| Rice Genome Annotation | LOC_Os02g48360.1 |
| Ricechip | LOC_Os02g48360.1 |
| KEGG | osa:4330512 dosa:Os02t0714200-01 |
| Entrez-Gene | 4330512 |