RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os02g48390.1 View Network Show in Genome Browser |
| Other Names | Os02g0714600 |
| Description | phosphoribosyl transferase, putative, expressed |
| Gene Attributes | Chromosome: Chr2 CDS Coordinates (5'-3'): 29625456-29628118 Nucleotide Length: 978 |
| Protein-coding | LOC_Os02g48390 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0016740 | transferase activity | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| GO:0005737 | cytoplasm | Cellular Component | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g58790 LOC_Os01g41030 LOC_Os01g49900 LOC_Os01g72240 LOC_Os01g65260 LOC_Os01g66379 LOC_Os02g24330 LOC_Os01g40620 LOC_Os01g60790 |
| Downstream Genes | LOC_Os05g51800 LOC_Os05g18750 LOC_Os03g22610 LOC_Os03g41612 LOC_Os05g47630 LOC_Os03g56840 LOC_Os05g38170 LOC_Os07g30150 LOC_Os05g08950 LOC_Os04g42520 LOC_Os11g16370 More.. |
| Pathways | |
|---|---|
| KEGG Pathways | rn00030 rn00230 rn01100 rn01110 rn01120 |
| Metacyc Pathways | PWY0-662 P1-PWY |
| Database Links | |
|---|---|
| Gramene | LOC_Os02g48390.1 |
| Rice Genome Annotation | LOC_Os02g48390.1 |
| Ricechip | LOC_Os02g48390.1 |
| KEGG | osa:4330515 dosa:Os02t0714600-01 |
| Entrez-Gene | 4330515 |