RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os02g48620.1 View Network Show in Genome Browser |
| Other Names | Os02g0717400 |
| Description | tetratricopeptide repeat, putative, expressed |
| Gene Attributes | Chromosome: Chr2 CDS Coordinates (5'-3'): 29763616-29775052 Nucleotide Length: 4281 |
| Protein-coding | LOC_Os02g48620 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g05340 LOC_Os02g22090 LOC_Os01g67134 LOC_Os01g62840 LOC_Os01g38970 LOC_Os01g18860 LOC_Os01g51380 LOC_Os02g32030 LOC_Os01g54030 LOC_Os01g22010 LOC_Os02g21970 More.. |
| Downstream Genes | LOC_Os06g37180 LOC_Os12g07300 LOC_Os12g03720 LOC_Os11g14220 LOC_Os11g04070 LOC_Os10g31864 LOC_Os08g13930 LOC_Os08g12820 LOC_Os07g42450 LOC_Os04g51630 LOC_Os04g02820 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os02g48620.1 |
| Rice Genome Annotation | LOC_Os02g48620.1 |
| Ricechip | LOC_Os02g48620.1 |
| KEGG | osa:4330529 dosa:Os02t0717400-01 |
| Entrez-Gene | 4330529 |