RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os02g49190.1 View Network Show in Genome Browser |
| Other Names | Os02g0723700 |
| Description | SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, putative, expressed |
| Gene Attributes | Chromosome: Chr2 CDS Coordinates (5'-3'): 30072267-30074360 Nucleotide Length: 648 |
| Protein-coding | LOC_Os02g49190 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0016043 | cellular component organization | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0003682 | chromatin binding | Molecular Function | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g10060 LOC_Os01g62370 LOC_Os02g02290 LOC_Os01g57110 LOC_Os01g62230 LOC_Os01g32750 LOC_Os01g47600 LOC_Os01g64640 LOC_Os01g73310 LOC_Os02g45940 LOC_Os01g61920 More.. |
| Downstream Genes | LOC_Os05g05230 LOC_Os05g41510 LOC_Os09g39420 LOC_Os06g04580 LOC_Os03g63940 LOC_Os04g01970 LOC_Os05g51550 LOC_Os09g03610 LOC_Os04g40420 LOC_Os09g09480 LOC_Os05g50370 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os02g49190.1 |
| Rice Genome Annotation | LOC_Os02g49190.1 |
| Ricechip | LOC_Os02g49190.1 |
| KEGG | osa:4330573 dosa:Os02t0723700-01 |
| Entrez-Gene | 4330573 |