RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os02g49720.1 View Network Show in Genome Browser |
| Other Names | Os02g0730000 |
| Description | aldehyde dehydrogenase, putative, expressed |
| Gene Attributes | Chromosome: Chr2 CDS Coordinates (5'-3'): 30392547-30396656 Nucleotide Length: 1752 |
| Protein-coding | LOC_Os02g49720 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0005739 | mitochondrion | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g40830 LOC_Os02g32490 LOC_Os02g07760 LOC_Os01g42630 LOC_Os01g57570 LOC_Os01g09460 LOC_Os02g36960 LOC_Os01g62900 LOC_Os02g37862 LOC_Os02g06640 LOC_Os02g32660 More.. |
| Downstream Genes | LOC_Os06g15990 LOC_Os05g38150 LOC_Os08g04460 LOC_Os04g33190 LOC_Os03g25050 LOC_Os04g59494 LOC_Os07g30300 LOC_Os08g36320 LOC_Os03g51080 LOC_Os10g32550 LOC_Os07g05570 More.. |
| Pathways | |
|---|---|
| KEGG Pathways | rn00330 rn00410 rn00260 rn00625 rn01100 rn01120 rn00071 rn00640 rn00010 rn00620 rn01110 rn00561 rn00280 rn00340 rn00040 rn00053 rn00380 rn00310 rn00903 |
| Metacyc Pathways | CHOLINE-BETAINE-ANA-PWY BETSYN-PWY PWY-3722 PWY1F-353 PWY0-1280 PROUT-PWY ARGASEDEG-PWY PWY-4561 HYDROXYPRODEG-PWY AST-PWY |
| Reference | |
|---|---|
| PubMed | 11027709 12832071 20634950 12609740 |
| Database Links | |
|---|---|
| Gramene | LOC_Os02g49720.1 |
| Rice Genome Annotation | LOC_Os02g49720.1 |
| Ricechip | LOC_Os02g49720.1 |
| KEGG | osa:4330612 dosa:Os02t0730000-02 |
| Entrez-Gene | 4330612 |