RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os02g49730.1 View Network Show in Genome Browser |
| Other Names | Os02g0730200,Os02g0730100 |
| Description | pre-mRNA processing ribonucleoprotein, binding region, putative, expressed |
| Gene Attributes | Chromosome: Chr2 CDS Coordinates (5'-3'): 30398308-30403935 Nucleotide Length: 1209 |
| Protein-coding | LOC_Os02g49730 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009790 | embryo development | Biological Process | IEA | |
| GO:0009790 | embryo development | Biological Process | IEA | |
| GO:0009791 | post-embryonic development | Biological Process | IEA | |
| GO:0009791 | post-embryonic development | Biological Process | IEA | |
| GO:0000003 | reproduction | Biological Process | IEA | |
| GO:0000003 | reproduction | Biological Process | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g01740 LOC_Os02g01250 LOC_Os01g15860 LOC_Os01g15310 LOC_Os02g30624 LOC_Os02g37430 LOC_Os02g14780 LOC_Os02g13990 LOC_Os02g05310 LOC_Os02g04480 LOC_Os02g03440 More.. |
| Downstream Genes | LOC_Os09g07500 LOC_Os10g35550 LOC_Os05g07050 LOC_Os03g53220 LOC_Os03g13760 LOC_Os04g31950 LOC_Os03g61640 LOC_Os05g24970 LOC_Os04g36810 LOC_Os03g50850 LOC_Os04g39444 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR1425-5p |
| Database Links | |
|---|---|
| Gramene | LOC_Os02g49730.1 |
| Rice Genome Annotation | LOC_Os02g49730.1 |
| Ricechip | LOC_Os02g49730.1 |
| KEGG | osa:4330613 dosa:Os02t0730100-00 |
| Entrez-Gene | 4343701 |