RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os02g49800.1 View Network Show in Genome Browser |
| Other Names | Os02g0730700 |
| Description | eukaryotic aspartyl protease domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr2 CDS Coordinates (5'-3'): 30437882-30441548 Nucleotide Length: 1722 |
| Protein-coding | LOC_Os02g49800 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0019538 | protein metabolic process | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g02600 LOC_Os02g27030 LOC_Os01g49529 LOC_Os02g46080 LOC_Os02g41500 LOC_Os01g06920 LOC_Os01g05810 LOC_Os01g47760 LOC_Os01g26174 LOC_Os01g74200 LOC_Os02g37940 More.. |
| Downstream Genes | LOC_Os10g02970 LOC_Os05g47770 LOC_Os04g12580 LOC_Os12g08180 LOC_Os04g12560 LOC_Os03g08790 LOC_Os05g48930 LOC_Os08g03350 LOC_Os03g29850 LOC_Os07g30960 LOC_Os03g17780 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR1846d-3p |
| Database Links | |
|---|---|
| Gramene | LOC_Os02g49800.1 |
| Rice Genome Annotation | LOC_Os02g49800.1 |
| Ricechip | LOC_Os02g49800.1 |
| KEGG | osa:4330617 dosa:Os02t0730700-02 |
| Entrez-Gene | 4330617 |