RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os02g49830.1 View Network Show in Genome Browser |
| Other Names | Os02g0730900 |
| Description | pentatricopeptide, putative, expressed |
| Gene Attributes | Chromosome: Chr2 CDS Coordinates (5'-3'): 30448042-30449508 Nucleotide Length: 1467 |
| Protein-coding | LOC_Os02g49830 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0016043 | cellular component organization | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006091 | generation of precursor metabolites and energy | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0015979 | photosynthesis | Biological Process | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g49820 LOC_Os02g03670 LOC_Os01g50030 LOC_Os02g33610 |
| Downstream Genes | LOC_Os06g15990 LOC_Os08g37700 LOC_Os03g43420 LOC_Os05g34470 LOC_Os06g39906 LOC_Os12g42980 LOC_Os09g27030 LOC_Os02g50280 LOC_Os06g04510 LOC_Os03g44230 LOC_Os03g62690 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os02g49830.1 |
| Rice Genome Annotation | LOC_Os02g49830.1 |
| Ricechip | LOC_Os02g49830.1 |
| KEGG | osa:4330619 dosa:Os02t0730900-00 |
| Entrez-Gene | 4330619 |