RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os02g49870.1 View Network Show in Genome Browser |
| Other Names | Os02g0731800,Os02g0731600 |
| Description | expressed protein |
| Gene Attributes | Chromosome: Chr2 CDS Coordinates (5'-3'): 30471980-30474465 Nucleotide Length: 576 |
| Protein-coding | LOC_Os02g49870 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| GO:0009579 | thylakoid | Cellular Component | IEA | |
| GO:0009579 | thylakoid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g55570 LOC_Os02g37060 LOC_Os01g17170 LOC_Os02g38210 LOC_Os02g06640 LOC_Os01g04730 LOC_Os02g32030 LOC_Os02g09150 LOC_Os01g45274 LOC_Os01g54870 LOC_Os02g44310 More.. |
| Downstream Genes | LOC_Os07g37240 LOC_Os03g55720 LOC_Os12g03070 LOC_Os07g32880 LOC_Os08g02630 LOC_Os04g38600 LOC_Os07g28610 LOC_Os12g05430 LOC_Os11g26850 LOC_Os10g37180 LOC_Os10g41410 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os02g49870.1 |
| Rice Genome Annotation | LOC_Os02g49870.1 |
| Ricechip | LOC_Os02g49870.1 |
| KEGG | osa:4330625 dosa:Os02t0731800-00dosa:Os02t0731600-01 |
| Entrez-Gene | 4343728 |