RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os02g50240.2 View Network Show in Genome Browser |
| Other Names | Os02g0735200 |
| Description | glutamine synthetase, catalytic domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr2 CDS Coordinates (5'-3'): 30674776-30677476 Nucleotide Length: 801 |
| Protein-coding | LOC_Os02g50240 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0005618 | cell wall | Cellular Component | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| GO:0005840 | ribosome | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g48960 LOC_Os01g37760 LOC_Os01g27630 LOC_Os02g07750 LOC_Os01g15260 LOC_Os02g45940 LOC_Os01g61920 LOC_Os02g32030 LOC_Os01g27390 LOC_Os01g53900 LOC_Os01g55830 More.. |
| Downstream Genes | LOC_Os10g31820 LOC_Os04g48410 LOC_Os10g30090 LOC_Os03g45170 LOC_Os06g45430 LOC_Os03g14880 LOC_Os12g42850 LOC_Os10g42960 LOC_Os10g39410 LOC_Os09g38020 LOC_Os09g26340 More.. |
| Reference | |
|---|---|
| PubMed | 15574840 15549232 11432939 21255162 15918879 2577497 |
| Database Links | |
|---|---|
| Gramene | LOC_Os02g50240.2 |
| Rice Genome Annotation | LOC_Os02g50240.2 |
| Ricechip | LOC_Os02g50240.2 |
| KEGG | osa:4330649 dosa:Os02t0735200-01 |
| Entrez-Gene | 4330649 |