RiceNetDB

RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.

General Information
Locus Name	LOC_Os02g50480.1 View Network Show in Genome Browser
Other Names	Os02g0738500,Os02g0738400
Description	histidine kinase, putative, expressed
Gene Attributes	Chromosome: Chr2 CDS Coordinates (5'-3'): 30823545-30829508 Nucleotide Length: 2994
Protein-coding	LOC_Os02g50480

Gene Ontology Classification
GO	Name	Type	Code
GO:0008150	biological_process	Biological Process	IEA
GO:0008150	biological_process	Biological Process	IEA
GO:0009056	catabolic process	Biological Process	IEA
GO:0009056	catabolic process	Biological Process	IEA
GO:0007154	cell communication	Biological Process	IEA
GO:0007154	cell communication	Biological Process	IEA
GO:0009987	cellular process	Biological Process	IEA
GO:0009987	cellular process	Biological Process	IEA
GO:0009908	flower development	Biological Process	IEA
GO:0009908	flower development	Biological Process	IEA
GO:0040007	growth	Biological Process	IEA
GO:0040007	growth	Biological Process	IEA
GO:0007275	multicellular organismal development	Biological Process	IEA
GO:0007275	multicellular organismal development	Biological Process	IEA
GO:0009791	post-embryonic development	Biological Process	IEA
GO:0009791	post-embryonic development	Biological Process	IEA
GO:0006464	protein modification process	Biological Process	IEA
GO:0006464	protein modification process	Biological Process	IEA
GO:0009628	response to abiotic stimulus	Biological Process	IEA
GO:0009628	response to abiotic stimulus	Biological Process	IEA
GO:0009607	response to biotic stimulus	Biological Process	IEA
GO:0009607	response to biotic stimulus	Biological Process	IEA
GO:0009719	response to endogenous stimulus	Biological Process	IEA
GO:0009719	response to endogenous stimulus	Biological Process	IEA
GO:0009991	response to extracellular stimulus	Biological Process	IEA
GO:0009991	response to extracellular stimulus	Biological Process	IEA
GO:0006950	response to stress	Biological Process	IEA
GO:0006950	response to stress	Biological Process	IEA
GO:0007165	signal transduction	Biological Process	IEA
GO:0007165	signal transduction	Biological Process	IEA
GO:0006810	transport	Biological Process	IEA
GO:0006810	transport	Biological Process	IEA
GO:0016301	kinase activity	Molecular Function	IEA
GO:0016301	kinase activity	Molecular Function	IEA
GO:0005515	protein binding	Molecular Function	IEA
GO:0005515	protein binding	Molecular Function	IEA
GO:0004872	receptor activity	Molecular Function	IEA
GO:0004872	receptor activity	Molecular Function	IEA
GO:0004871	signal transducer activity	Molecular Function	IEA
GO:0004871	signal transducer activity	Molecular Function	IEA
GO:0005886	plasma membrane	Cellular Component	IEA
GO:0005886	plasma membrane	Cellular Component	IEA

Regulatory Genes ( Show Network In Viewer )
Upstream Genes	LOC_Os01g32660 LOC_Os02g08364 LOC_Os01g72880 LOC_Os02g37920 LOC_Os02g05630 LOC_Os02g32590 LOC_Os02g05480 LOC_Os01g54550 LOC_Os01g62244
Downstream Genes	LOC_Os06g06090 LOC_Os03g17700 LOC_Os07g44330 LOC_Os09g35790 LOC_Os08g43334 LOC_Os03g25400 LOC_Os07g01820 LOC_Os03g54160 LOC_Os06g05520 LOC_Os10g38950 LOC_Os08g06060 More..

miRNA Regulations
miRNAs	osa-miR5494

Reference
PubMed	22642989 16919402

Database Links
Gramene	LOC_Os02g50480.1
Rice Genome Annotation	LOC_Os02g50480.1
Ricechip	LOC_Os02g50480.1
KEGG	dosa:Os02t0738400-01
Entrez-Gene	9271841