RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os02g50630.1 View Network Show in Genome Browser |
| Other Names | Os02g0739700 |
| Description | E2F family transcription factor protein, putative, expressed |
| Gene Attributes | Chromosome: Chr2 CDS Coordinates (5'-3'): 30924455-30927914 Nucleotide Length: 1326 |
| Protein-coding | LOC_Os02g50630 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0007049 | cell cycle | Biological Process | IEA | |
| GO:0006259 | DNA metabolic process | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0003677 | DNA binding | Molecular Function | IEA | |
| GO:0003700 | sequence-specific DNA binding transcription factor activity | Molecular Function | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g70560 LOC_Os01g08150 LOC_Os01g62040 LOC_Os01g56020 |
| Downstream Genes | LOC_Os03g05760 LOC_Os08g40170 LOC_Os09g38450 LOC_Os06g06510 LOC_Os07g01490 LOC_Os03g56070 LOC_Os10g30420 LOC_Os11g29380 LOC_Os11g05730 LOC_Os03g45760 LOC_Os04g47580 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os02g50630.1 |
| Rice Genome Annotation | LOC_Os02g50630.1 |
| Ricechip | LOC_Os02g50630.1 |
| KEGG | osa:4330674 dosa:Os02t0739700-01 |
| Entrez-Gene | 4330674 |