RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os02g51430.1 View Network Show in Genome Browser |
| Other Names | Os02g0749500 |
| Description | SEC6, putative, expressed |
| Gene Attributes | Chromosome: Chr2 CDS Coordinates (5'-3'): 31501018-31512420 Nucleotide Length: 2268 |
| Protein-coding | LOC_Os02g51430 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009653 | anatomical structure morphogenesis | Biological Process | IEA | |
| GO:0030154 | cell differentiation | Biological Process | IEA | |
| GO:0016049 | cell growth | Biological Process | IEA | |
| GO:0016043 | cellular component organization | Biological Process | IEA | |
| GO:0007275 | multicellular organismal development | Biological Process | IEA | |
| GO:0009856 | pollination | Biological Process | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| GO:0005737 | cytoplasm | Cellular Component | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g56600 LOC_Os01g62244 LOC_Os02g28810 LOC_Os01g50616 LOC_Os02g04020 LOC_Os01g68380 LOC_Os01g14950 LOC_Os02g48990 LOC_Os02g24430 LOC_Os01g24950 LOC_Os02g04030 More.. |
| Downstream Genes | LOC_Os12g13590 LOC_Os03g11440 LOC_Os09g17840 LOC_Os09g17830 LOC_Os03g06760 LOC_Os06g23430 LOC_Os06g19680 LOC_Os05g44310 LOC_Os03g14260 LOC_Os02g52250 LOC_Os05g46720 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os02g51430.1 |
| Rice Genome Annotation | LOC_Os02g51430.1 |
| Ricechip | LOC_Os02g51430.1 |
| KEGG | osa:9268086 dosa:Os02t0749500-01 |
| Entrez-Gene | 9268086 |