RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os02g51480.1 View Network Show in Genome Browser |
| Other Names | Os02g0750400 |
| Description | PPR repeat domain containing protein, putative, expressed |
| Gene Attributes | Chromosome: Chr2 CDS Coordinates (5'-3'): 31529599-31531859 Nucleotide Length: 1488 |
| Protein-coding | LOC_Os02g51480 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009790 | embryo development | Biological Process | IEA | |
| GO:0009791 | post-embryonic development | Biological Process | IEA | |
| GO:0000003 | reproduction | Biological Process | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g54540 LOC_Os01g66600 LOC_Os02g07230 LOC_Os02g05890 |
| Downstream Genes | LOC_Os11g38030 LOC_Os11g34210 LOC_Os11g02450 LOC_Os03g03020 LOC_Os03g03360 LOC_Os08g29110 LOC_Os03g25960 LOC_Os07g38300 LOC_Os11g26160 LOC_Os03g56840 LOC_Os05g49220 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR2925 |
| Database Links | |
|---|---|
| Gramene | LOC_Os02g51480.1 |
| Rice Genome Annotation | LOC_Os02g51480.1 |
| Ricechip | LOC_Os02g51480.1 |
| KEGG | osa:4330740 dosa:Os02t0750400-01 |
| Entrez-Gene | 4330740 |