RiceNetDB

RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.

General Information
Locus Name	LOC_Os02g52340.1 View Network Show in Genome Browser
Other Names	Os02g0761000
Description	OsMADS22 - MADS-box family gene with MIKCc type-box, expressed
Gene Attributes	Chromosome: Chr2 CDS Coordinates (5'-3'): 32038902-32045130 Nucleotide Length: 687
Protein-coding	LOC_Os02g52340

Gene Ontology Classification
GO	Name	Type	Code
GO:0009058	biosynthetic process	Biological Process	IEA
GO:0030154	cell differentiation	Biological Process	IEA
GO:0009908	flower development	Biological Process	IEA
GO:0007275	multicellular organismal development	Biological Process	IEA
GO:0006139	nucleobase, nucleoside, nucleotide and nucleic acid metabolic process	Biological Process	IEA
GO:0009628	response to abiotic stimulus	Biological Process	IEA
GO:0006412	translation	Biological Process	IEA
GO:0003676	nucleic acid binding	Molecular Function	IEA
GO:0005515	protein binding	Molecular Function	IEA
GO:0003700	sequence-specific DNA binding transcription factor activity	Molecular Function	IEA
GO:0045182	translation regulator activity	Molecular Function	IEA
GO:0005634	nucleus	Cellular Component	IEA

Regulatory Genes ( Show Network In Viewer )
Upstream Genes	LOC_Os01g55040 LOC_Os02g38020 LOC_Os02g35010 LOC_Os02g48000 LOC_Os02g48840 LOC_Os02g44642 LOC_Os02g14900 LOC_Os01g55820 LOC_Os01g22710 LOC_Os02g04240 LOC_Os01g34890 More..
Downstream Genes	LOC_Os07g01820 LOC_Os06g08380 LOC_Os11g10100 LOC_Os03g54160 LOC_Os09g26180 LOC_Os06g27890 LOC_Os03g03610 LOC_Os07g41370 LOC_Os06g51270 LOC_Os04g35700 LOC_Os08g41950 More..

Reference
PubMed	15682279

Database Links
Gramene	LOC_Os02g52340.1
Rice Genome Annotation	LOC_Os02g52340.1
Ricechip	LOC_Os02g52340.1
KEGG	osa:4330805 dosa:Os02t0761000-01
Entrez-Gene	4330805