RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os02g52710.1 View Network Show in Genome Browser |
| Other Names | Os02g0765600 |
| Description | alpha-amylase precursor, putative, expressed |
| Gene Attributes | Chromosome: Chr2 CDS Coordinates (5'-3'): 32248279-32250180 Nucleotide Length: 1305 |
| Protein-coding | LOC_Os02g52710 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0009719 | response to endogenous stimulus | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0005576 | extracellular region | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g32490 LOC_Os01g25386 LOC_Os02g44510 LOC_Os01g66940 LOC_Os02g02410 LOC_Os02g40830 LOC_Os01g59110 LOC_Os01g59100 LOC_Os02g08180 LOC_Os02g32660 LOC_Os01g60190 More.. |
| Downstream Genes | LOC_Os04g41140 LOC_Os02g56850 LOC_Os08g40930 LOC_Os09g29404 LOC_Os03g56580 LOC_Os06g26234 LOC_Os09g39570 LOC_Os06g05740 LOC_Os04g32330 LOC_Os08g05880 LOC_Os04g17050 More.. |
| Pathways | |
|---|---|
| KEGG Pathways | rn00500 rn01100 |
| Metacyc Pathways | PWY-842 |
| Reference | |
|---|---|
| PubMed | 9506846 2263460 |
| Database Links | |
|---|---|
| Gramene | LOC_Os02g52710.1 |
| Rice Genome Annotation | LOC_Os02g52710.1 |
| Ricechip | LOC_Os02g52710.1 |
| KEGG | osa:4330832 dosa:Os02t0765600-01 |
| Entrez-Gene | 4330832 |