RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os02g52940.3 View Network Show in Genome Browser |
| Other Names | Os02g0768600 |
| Description | soluble inorganic pyrophosphatase, putative, expressed |
| Gene Attributes | Chromosome: Chr2 CDS Coordinates (5'-3'): 32374870-32378546 Nucleotide Length: 732 |
| Protein-coding | LOC_Os02g52940 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0009628 | response to abiotic stimulus | Biological Process | IEA | |
| GO:0009607 | response to biotic stimulus | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| GO:0009579 | thylakoid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g73310 LOC_Os01g46070 LOC_Os01g72240 LOC_Os01g16240 LOC_Os02g02560 LOC_Os01g40570 LOC_Os01g17190 LOC_Os01g65260 LOC_Os02g32490 LOC_Os01g72250 LOC_Os02g05330 More.. |
| Downstream Genes | LOC_Os10g32550 LOC_Os02g52950 LOC_Os02g57220 LOC_Os09g38030 LOC_Os08g23730 LOC_Os05g01600 LOC_Os08g25460 LOC_Os11g20790 LOC_Os06g15420 LOC_Os12g13320 LOC_Os12g40130 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os02g52940.3 |
| Rice Genome Annotation | LOC_Os02g52940.3 |
| Ricechip | LOC_Os02g52940.3 |
| KEGG | osa:4330852 dosa:Os02t0768600-01 |
| Entrez-Gene | 4330852 |