RiceNetDB

RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.

General Information
Locus Name	LOC_Os02g53140.1 View Network Show in Genome Browser
Other Names	Os02g0771100
Description	COP1, putative, expressed
Gene Attributes	Chromosome: Chr2 CDS Coordinates (5'-3'): 32528037-32533583 Nucleotide Length: 2058
Protein-coding	LOC_Os02g53140

Gene Ontology Classification
GO	Name	Type	Code
GO:0009058	biosynthetic process	Biological Process	IEA
GO:0009987	cellular process	Biological Process	IEA
GO:0006259	DNA metabolic process	Biological Process	IEA
GO:0009791	post-embryonic development	Biological Process	IEA
GO:0006464	protein modification process	Biological Process	IEA
GO:0000003	reproduction	Biological Process	IEA
GO:0009628	response to abiotic stimulus	Biological Process	IEA
GO:0009605	response to external stimulus	Biological Process	IEA
GO:0006950	response to stress	Biological Process	IEA
GO:0019748	secondary metabolic process	Biological Process	IEA
GO:0003824	catalytic activity	Molecular Function	IEA
GO:0005515	protein binding	Molecular Function	IEA
GO:0005622	intracellular	Cellular Component	IEA
GO:0005634	nucleus	Cellular Component	IEA

Regulatory Genes ( Show Network In Viewer )
Upstream Genes	LOC_Os01g01484 LOC_Os02g41550 LOC_Os02g39710 LOC_Os02g36380 LOC_Os02g10860 LOC_Os02g19210 LOC_Os01g15020
Downstream Genes	LOC_Os04g52460 LOC_Os04g42020 LOC_Os04g37920 LOC_Os03g19590 LOC_Os11g07480 LOC_Os12g07450 LOC_Os03g64110 LOC_Os08g01680 LOC_Os02g57220 LOC_Os05g51480 LOC_Os03g08830 More..

Reference
PubMed	21705640

Database Links
Gramene	LOC_Os02g53140.1
Rice Genome Annotation	LOC_Os02g53140.1
Ricechip	LOC_Os02g53140.1
KEGG	osa:4330868 dosa:Os02t0771100-01
Entrez-Gene	4330868