RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os02g53200.1 View Network Show in Genome Browser |
| Other Names | Os02g0771700 |
| Description | glucan endo-1,3-beta-glucosidase precursor, putative, expressed |
| Gene Attributes | Chromosome: Chr2 CDS Coordinates (5'-3'): 32566914-32570045 Nucleotide Length: 1542 |
| Protein-coding | LOC_Os02g53200 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0005975 | carbohydrate metabolic process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0005623 | cell | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g15690 LOC_Os02g16500 LOC_Os02g42380 LOC_Os01g42520 LOC_Os01g55610 LOC_Os01g59150 LOC_Os01g09860 LOC_Os02g44630 LOC_Os01g55040 LOC_Os02g19640 LOC_Os02g15900 More.. |
| Downstream Genes | LOC_Os06g05550 LOC_Os03g08790 LOC_Os04g38570 LOC_Os08g35090 LOC_Os03g50810 LOC_Os03g49600 LOC_Os08g39550 LOC_Os03g19780 LOC_Os06g16330 LOC_Os04g58840 LOC_Os04g48490 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR1848 osa-miR529b |
| Database Links | |
|---|---|
| Gramene | LOC_Os02g53200.1 |
| Rice Genome Annotation | LOC_Os02g53200.1 |
| Ricechip | LOC_Os02g53200.1 |
| KEGG | osa:4330874 dosa:Os02t0771700-01 |
| Entrez-Gene | 4330874 |