RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os02g53430.1 View Network Show in Genome Browser |
| Other Names | Os02g0774500 |
| Description | DNA-3-methyladenine glycosylase, putative, expressed |
| Gene Attributes | Chromosome: Chr2 CDS Coordinates (5'-3'): 32695379-32697585 Nucleotide Length: 861 |
| Protein-coding | LOC_Os02g53430 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0006259 | DNA metabolic process | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0003677 | DNA binding | Molecular Function | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g49330 LOC_Os01g58680 LOC_Os02g04490 LOC_Os02g08300 LOC_Os02g36710 LOC_Os02g14110 LOC_Os01g58690 LOC_Os02g42320 LOC_Os01g55270 LOC_Os01g12730 LOC_Os02g26660 More.. |
| Downstream Genes | LOC_Os06g35540 LOC_Os03g18180 LOC_Os05g48310 LOC_Os05g48220 LOC_Os09g24540 LOC_Os03g25050 LOC_Os06g43760 LOC_Os05g28290 LOC_Os02g54470 LOC_Os03g26970 LOC_Os07g44740 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os02g53430.1 |
| Rice Genome Annotation | LOC_Os02g53430.1 |
| Ricechip | LOC_Os02g53430.1 |
| KEGG | osa:4330890 dosa:Os02t0774500-01 |
| Entrez-Gene | 4330890 |