RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os02g53860.1 View Network Show in Genome Browser |
| Other Names | Os02g0779200 |
| Description | OsSub22 - Putative Subtilisin homologue, expressed |
| Gene Attributes | Chromosome: Chr2 CDS Coordinates (5'-3'): 32985005-32987845 Nucleotide Length: 2349 |
| Protein-coding | LOC_Os02g53860 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0019538 | protein metabolic process | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0005618 | cell wall | Cellular Component | IEA | |
| GO:0005576 | extracellular region | Cellular Component | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0005773 | vacuole | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g19150 LOC_Os01g52010 LOC_Os01g51980 LOC_Os01g62070 LOC_Os02g47510 LOC_Os02g49700 LOC_Os02g47210 |
| Downstream Genes | LOC_Os07g46570 LOC_Os05g49380 LOC_Os03g10860 LOC_Os03g53300 LOC_Os09g12540 LOC_Os05g50930 LOC_Os03g24030 LOC_Os03g04770 LOC_Os06g49040 LOC_Os04g57440 LOC_Os07g12530 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR166j-5p osa-miR5337b osa-miR5819 |
| Database Links | |
|---|---|
| Gramene | LOC_Os02g53860.1 |
| Rice Genome Annotation | LOC_Os02g53860.1 |
| Ricechip | LOC_Os02g53860.1 |
| KEGG | osa:4330916 dosa:Os02t0779200-01 |
| Entrez-Gene | 4330916 |