RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os02g54060.1 View Network Show in Genome Browser |
| Other Names | Os02g0781400 |
| Description | chaperonin, putative, expressed |
| Gene Attributes | Chromosome: Chr2 CDS Coordinates (5'-3'): 33114780-33117303 Nucleotide Length: 768 |
| Protein-coding | LOC_Os02g54060 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0009628 | response to abiotic stimulus | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0005576 | extracellular region | Cellular Component | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0005739 | mitochondrion | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| GO:0009579 | thylakoid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g01280 LOC_Os02g14929 LOC_Os02g22780 LOC_Os01g54870 LOC_Os01g49290 LOC_Os01g61814 LOC_Os01g59730 LOC_Os02g14059 LOC_Os01g60790 LOC_Os01g59990 LOC_Os01g67134 More.. |
| Downstream Genes | LOC_Os12g17910 LOC_Os10g32550 LOC_Os06g02380 LOC_Os03g04970 LOC_Os03g64210 LOC_Os09g38980 LOC_Os05g46290 LOC_Os05g48290 LOC_Os03g59020 LOC_Os03g42220 LOC_Os10g37060 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os02g54060.1 |
| Rice Genome Annotation | LOC_Os02g54060.1 |
| Ricechip | LOC_Os02g54060.1 |
| KEGG | osa:4330925 dosa:Os02t0781400-02 |
| Entrez-Gene | 4330925 |