RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os02g54110.1 View Network Show in Genome Browser |
| Other Names | Os02g0782100 |
| Description | expressed protein |
| Gene Attributes | Chromosome: Chr2 CDS Coordinates (5'-3'): 33146903-33154107 Nucleotide Length: 3819 |
| Protein-coding | LOC_Os02g54110 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g50370 LOC_Os01g04260 LOC_Os01g11300 LOC_Os01g67134 LOC_Os02g02360 LOC_Os01g65220 LOC_Os01g69970 LOC_Os01g40250 LOC_Os01g40340 LOC_Os02g37870 LOC_Os01g33030 More.. |
| Downstream Genes | LOC_Os11g19250 LOC_Os04g58830 LOC_Os04g46310 LOC_Os12g07300 LOC_Os03g05720 LOC_Os03g58810 LOC_Os10g42320 LOC_Os06g01980 LOC_Os03g02110 LOC_Os09g30210 LOC_Os04g54820 More.. |
| Pathways | |
|---|---|
| KEGG Pathways | rn00400 rn01100 rn01110 |
| Metacyc Pathways | ARO-PWY |
| Database Links | |
|---|---|
| Gramene | LOC_Os02g54110.1 |
| Rice Genome Annotation | LOC_Os02g54110.1 |
| Ricechip | LOC_Os02g54110.1 |
| KEGG | osa:4330930 dosa:Os02t0782100-01 |
| Entrez-Gene | 4330930 |