RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os02g54254.2 View Network Show in Genome Browser |
| Other Names | Os02g0783700,Os02g0783625 |
| Description | saccharopine dehydrogenase, putative, expressed |
| Gene Attributes | Chromosome: Chr2 CDS Coordinates (5'-3'): 33253087-33266582 Nucleotide Length: 3120 |
| Protein-coding | LOC_Os02g54254 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009056 | catabolic process | Biological Process | IEA | |
| GO:0009056 | catabolic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0009628 | response to abiotic stimulus | Biological Process | IEA | |
| GO:0009628 | response to abiotic stimulus | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0005737 | cytoplasm | Cellular Component | IEA | |
| GO:0005737 | cytoplasm | Cellular Component | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g70310 LOC_Os02g30050 LOC_Os02g19770 LOC_Os02g51490 LOC_Os01g38670 LOC_Os02g35060 LOC_Os02g44500 LOC_Os01g38680 LOC_Os02g01560 LOC_Os02g10310 LOC_Os01g25610 More.. |
| Downstream Genes | LOC_Os07g40620 LOC_Os12g04260 LOC_Os12g03960 LOC_Os11g20790 LOC_Os09g18320 LOC_Os04g20220 LOC_Os12g13380 LOC_Os11g04160 LOC_Os06g23440 LOC_Os11g11390 LOC_Os07g22600 More.. |
| Reference | |
|---|---|
| PubMed | 21037241 |
| Database Links | |
|---|---|
| Gramene | LOC_Os02g54254.2 |
| Rice Genome Annotation | LOC_Os02g54254.2 |
| Ricechip | LOC_Os02g54254.2 |
| KEGG | osa:4330940 dosa:Os02t0783700-01dosa:Os02t0783625-00 |
| Entrez-Gene | 4330940 |