RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os02g54490.1 View Network Show in Genome Browser |
| Other Names | Os02g0785900 |
| Description | nucleotide binding protein, putative, expressed |
| Gene Attributes | Chromosome: Chr2 CDS Coordinates (5'-3'): 33364263-33370987 Nucleotide Length: 2355 |
| Protein-coding | LOC_Os02g54490 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0000166 | nucleotide binding | Molecular Function | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g10020 LOC_Os01g16190 LOC_Os02g42320 LOC_Os02g04100 LOC_Os02g21970 LOC_Os02g53060 LOC_Os01g59600 LOC_Os02g10640 LOC_Os02g03060 LOC_Os02g38810 LOC_Os01g16650 More.. |
| Downstream Genes | LOC_Os03g08280 LOC_Os05g30800 LOC_Os06g07978 LOC_Os06g07878 LOC_Os06g07140 LOC_Os08g12820 LOC_Os09g33986 LOC_Os05g32600 LOC_Os09g32800 LOC_Os03g02680 LOC_Os03g26970 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR414 |
| Database Links | |
|---|---|
| Gramene | LOC_Os02g54490.1 |
| Rice Genome Annotation | LOC_Os02g54490.1 |
| Ricechip | LOC_Os02g54490.1 |
| KEGG | osa:4330947 dosa:Os02t0785900-00 |
| Entrez-Gene | 4330947 |